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Notes:
   Animal Body
   Arthropods
   Biochem
   Cell Cycle
   Cell Interactions
   Cell Structure
   Circulation Respiration
   Communities
   Digestion
   DNA
   Ecosystems
   Energy
   Evolution Evidence
   Future of Biosphere
   Genetic Engineering
   Gene Function
   Genetics
   Hormones
   Human Evolution
   Immunity
   Species Interaction
   Kidneys
   Locomotion
   Membranes
   Mollusks
   Mutation
   Nervous
   Non-Coelmic
   Photosynthesis
   Plant Physiology
   Population Genetics
   Population Dynamics
   Cellular Respiration
   Sensory
   Speciation
   Taxonomy
   Vertebrates
   Vertebrate Org
Vocabulary:
   1,2,3,4,5,6,7,8,9,10,
   11,12,13,14,15,
   16,17,18,19,20,
   21,22,23,24,25,
   26,27,28,29,30,
   31,32,33,34,35,
   36,37,38,39,40,
   41,42,43,44,45,
   46,47,48,49,50,
   51,52,53,54

Cell Cycle

      1. Mitosis -

ef: Replication of genetic materials in order to produce identical cells
      2. Prokaryotic Cell Division

Bacteria

Circular DNA

Single strand DNA

Attached at particular site on the cell membranes
Replication Origin

Where DNA replication begins

Enzymes mediated process

Results in exact copy of the chromosome attached side by side to the original

Cell Division
Size dependent (Surface area to volume ratio)

Called “Binary Fission”

New cell wall and membrane begin to form between the two copies of DNA

Equal distribution of cellular material (Form of Asexual Reproduction)

Identical copies of parent are produced
      3. Eukaryotic Cell Division


It is a linear molecule

Coils up into chromosome

Fleming - 1882 (Viewed “Mitosis”)
Humans have 46 chromosomes

Ducks - 80

Possum/Toad - 22

Fruit Fly - 8

Penicillin - 1

Double Helix

½ billion nucleotides per chromosome!!

2 inches long ~> 1000 books w/ 1000 pages w/ 500 words per page

Chromosomes

Made up of DNA & protein (40% DNA - 60% Protein)

Exists as chromatin (uncoiled)

Coiling

Every 200 nucleotides is a little ball of protein with DNA wrapped around it

Nucleosomes -

8 histones

W/ DNA bound to it

DNA is a (-) molecule

Histones are (+) proteins (most proteins are -)

Super coiling ~> nucleosomes of DNA segments coiling tightly together

Chromatin

Heterochoromatin - condensed portions of DNA; inexpressible

Euchromatin - uncondensed portion; expressible

Final coiling occurs during cell division, called a chromosome

Karyotype - picture (array) of chromosomes

Differences in Chromosomes

Arm Length

Location of centromere

Constricted regions (pinche         d)

Counting centromeres to determine the number of chromosomes

      4. Cell Cycle
Cells have varying lengths of cycles
Embryo – 20 min
Fruit Flies – 8 min
Most organisms have @ 24hrs, some however, last years
M phase is about 1 hr
Some cells stay in GO (dormant in reproduction)
Nerve cells; muscle cells (injury can stimulate cell cycle)

Growth

Synthesis

Mitosis

Cytokinesis

G1

S

G2

M

C

“Gap” “Growth”

Primary growth

-Chromatin-

Genome Replication

-Chromatin-

Chromosome condensation

Microtubule synthesis

Organelle replication

“Mitosis”

Chromosome separation

“Cytokinesis”

Cell Division

            Interphase
- G1, S, G2
- Cell growth
- DNA replication ~> middle to end of interphase
- Protein synthesis
Mitosis
- Prophase
- Metaphase
- Anaphase
- Telophase
Mitotic Cycle
Interphase (G, S, G2)
Chromosomes replicate during S producing two daughter copies called “sister chromatids”
Sister chromotids bind together to a centromere
Centromere
Highly condensed sequence of DNA
220 nucleotids long
Bound to a protein called “Kinetochore”
Chromosomes condense during G2
Centrioles replicate (coordinated by microtubule         s) (not in plants)
Prophase
Chromosomes condense to visibility w/ light microscope
Nucleolus disappears \ NO RNA synthesis
Assemble microtubule apparatus
Centriole pairs separate
Aster Formation
Nuclear membrane disintegrates; contents “stored” in ER
Plane of cell division is ^ to spindle fibers
Metaphase
Sister chromatids align along the center of the cell. “Metaphase Plate” <~ Not a true structure
Centromere begin to divide at kinetochores
Anaphase
Physical separation of sister chromatids
Poles separate by microtubule sliding
Sister chromatids go to opposite poles by microtubular shortening
Telophase
Mitotic apparatus disassembles
Nuclear envelopes established
Normal genetic activities resume
Actin Filaments
- Tightens membranes; pinching ~> “Cleavage Furrow”
Cell Plate
- Cellulose precursor
- “Wall” eventually becomes cell wall
Cytokinesis
- Separation of cells
- Cells return back to normal activities
Cell Cycle Control
General Control
P53 Gene – does checking on DNA
Cell cycle is controlled by various checker proteins at several points
G1 check points ~> assesses cell growth
G2 check points ~> DNA replication
M check point
Occurs at metaphase
Initiates the rest of mitosis
Assesses DNA (pair correctly)
Molecular Control
CdK
Cyclin-dependent protein kinases
Phosphorylate serine & theronine of important molecules
Eukaryotes – different CdK for each check point
Phosphorylation activates that molecules to cause procession of process
MPF
· Mitosis Promoting Factor
· Causes you to move to next check
G2 Check Point
· G2 cyclin is produced during G2.  The G2 cyclin binds to CdK to form MPF.  MPF phosphorylation is positive feedback.  When MPF levels reach a threshold M is triggered.  MPF in mitosis causes degragation of of cyclin.  Loss of cyclin is loss of MPF.  Drop below threshold, mitosis stops.
G1 Check Point
· Same function as G2
· Cell size sends signal to make cyclins & CdK
· High enough ratio triggers production of CdK & cyclins need for S
Cell Cycle On-Off Controls
In eukaryotes, growth factors produced in a variety of situations are what stimulate or inhibit cell division
Molecules which are intracellular signals
50 known – PDGF – “Platelet Derived Growth Factors”
PDGF
Override regular control on cell division
Bind to receptor (specific)
This & EGF (Epiderma         l) are general factors
Others are specific
Need a combination of factors to complete task
Deprive cells of these & they stop in G1
Cancer
Uncontrolled cell growth
Proto-oncogenes
· Have the ability to be oncogenes
· Usually cause cell division
· BRCA1 – Breast Cancer
Onocogenes
· Genes which have mutated and are cancerous
· 30+ types
· myc, ras, foc, jun (stimulate cyclin/CdK production)
· Dominant: only one mutated copy will cause cancer
Tumor Suppressor Genes
· Block division by inhibiting cyclin to CdK binding
· Recessive: both copies must mutate to cause cancer
Dephosphorylation
· Rb binds myc/fas etc.  Growth factors activate phosphorylating kinases which causes Rb to release proteins & allow division to occur
p53
· “Guardian Angel Gene”
· Makes p53 protein
· DNA checker
· Repairs damage or initiates **Apoptosis**
Meiosis/Sexual Reproduction – “Reduction Division”
Gametes – (haploid)
Egg (oocyte)
Sperm (spermatocyte)
Somatic – (diploid)
Body Cells
Fuse to form a zygote in process of fertilization, or syngamy
To do this, gametes must have a way to produce # of chromosomes in half or else you would get unwieldy amounts of DNA
\ Meiosis – reduction division where # of chromosomes is cut in half during gamete formation
Sexual Life Cycle
Alteration of Generations
Duplication by mitosis
Protists – mitosis/meiosis by individuals
Plants – mitosis ~> meiosis ~> mitosis
Animals – Germ line cells; put aside at beginning
Stages of Meiosis
Two Divisions
Diploid ~> haploid
Haploid ~> haploid
Unique Features
Homologues join along length & exchange genetic material (crossing over)
No replication between divisions
Two Phase – Meiosis I & Meiosis II
Meiosis I
Prophase I
· Chromosomes coil to visibility
· Homologous pairs live up in synapsis to form a tetrad
· A synaptonemal complex forms between the homologues
· DNA unwind & forms pairs with DNA on other homogue (1 w/ 1A)
· DNA segments are exchanged (crossing over)
· 2 copies of two versions of each of 23 gene types
· Chiasmata – places of contact between homologues that serve as evidence for crossing over

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